HCSGD entry for TEF
1. General information
| Official gene symbol | TEF |
|---|---|
| Entrez ID | 7008 |
| Gene full name | thyrotrophic embryonic factor |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003690 | Double-stranded DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
| GO:0048511 | Rhythmic process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5389896395 | 0.6467429657 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0163249156 |
| GSE13712_SHEAR | Down | -0.0791629403 |
| GSE13712_STATIC | Up | 0.0811359569 |
| GSE19018 | Up | 0.2569587735 |
| GSE19899_A1 | Down | -0.0561125027 |
| GSE19899_A2 | Down | -0.1879597255 |
| PubMed_21979375_A1 | Down | -0.4196929239 |
| PubMed_21979375_A2 | Down | -0.4875940643 |
| GSE35957 | Up | 0.1958709980 |
| GSE36640 | Up | 0.1538683984 |
| GSE54402 | Down | -0.2292393799 |
| GSE9593 | Up | 0.2287033605 |
| GSE43922 | Up | 0.0134847598 |
| GSE24585 | Up | 0.1249476115 |
| GSE37065 | Up | 0.0690183960 |
| GSE28863_A1 | Up | 0.4529659893 |
| GSE28863_A2 | Up | 0.0033026496 |
| GSE28863_A3 | Down | -0.0787292850 |
| GSE28863_A4 | Up | 0.1222619603 |
| GSE48662 | Up | 0.1160297871 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT021130 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046057 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
