HCSGD entry for TAF11

1. General information

Official gene symbolTAF11
Entrez ID6882
Gene full nameTAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa
Other gene symbolsMGC:15243 TAF2I TAFII28
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003677DNA bindingIEAmolecular_function
GO:0003713Transcription coactivator activityIDAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0005669Transcription factor TFIID complexIDAcellular_component
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0006366Transcription from RNA polymerase II promoterIC TASbiological_process
GO:0006367Transcription initiation from RNA polymerase II promoterIC TASbiological_process
GO:0006368Transcription elongation from RNA polymerase II promoterTASbiological_process
GO:0010467Gene expressionTASbiological_process
GO:0016032Viral processTASbiological_process
GO:0042809Vitamin D receptor bindingIPImolecular_function
GO:0043923Positive regulation by host of viral transcriptionIDAbiological_process
GO:0046966Thyroid hormone receptor bindingIPImolecular_function
GO:0046982Protein heterodimerization activityIEAmolecular_function
GO:0047485Protein N-terminus bindingIPImolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.94112166710.16914174990.99999024730.7956634382

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1894296328
GSE13712_SHEARDown-0.0362561303
GSE13712_STATICUp0.0045146573
GSE19018Down-0.5218847185
GSE19899_A1Up0.0195847957
GSE19899_A2Down-0.0127373404
PubMed_21979375_A1Down-0.5380825161
PubMed_21979375_A2Down-0.0933596442
GSE35957Up0.0486597927
GSE36640Down-0.3118949928
GSE54402Up0.0045396342
GSE9593Down-0.2383812308
GSE43922Up0.0476965597
GSE24585Down-0.0900322765
GSE37065Down-0.0786793769
GSE28863_A1Up0.3602584676
GSE28863_A2Up0.3876150288
GSE28863_A3Down-0.2940150179
GSE28863_A4Down-0.1569871720
GSE48662Down-0.1530095009

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-877-5pMIMAT0004949MIRT037327CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.