HCSGD entry for SYN1
1. General information
| Official gene symbol | SYN1 |
|---|---|
| Entrez ID | 6853 |
| Gene full name | synapsin I |
| Other gene symbols | SYN1a SYN1b SYNI |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0003824 | Catalytic activity | IEA | molecular_function |
| GO:0005215 | Transporter activity | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0007268 | Synaptic transmission | TAS | biological_process |
| GO:0007269 | Neurotransmitter secretion | IEA | biological_process |
| GO:0008021 | Synaptic vesicle | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030425 | Dendrite | IEA | cellular_component |
| GO:0048306 | Calcium-dependent protein binding | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1860051404 | 0.9736495650 | 0.8418291946 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0354469463 |
| GSE13712_SHEAR | Up | 0.1736508714 |
| GSE13712_STATIC | Up | 0.0099353714 |
| GSE19018 | Up | 0.0326737548 |
| GSE19899_A1 | Up | 0.1296772696 |
| GSE19899_A2 | Up | 0.1431630789 |
| PubMed_21979375_A1 | Down | -0.0799085331 |
| PubMed_21979375_A2 | Up | 0.3042595416 |
| GSE35957 | Down | -0.0137042689 |
| GSE36640 | Down | -0.1697464255 |
| GSE54402 | Up | 0.2816610947 |
| GSE9593 | Up | 0.0212453514 |
| GSE43922 | Up | 0.1177786050 |
| GSE24585 | Up | 0.1169805180 |
| GSE37065 | Down | -0.0872576085 |
| GSE28863_A1 | Down | -0.0162369115 |
| GSE28863_A2 | Up | 0.1840463745 |
| GSE28863_A3 | Up | 0.3401306983 |
| GSE28863_A4 | Up | 0.0884342877 |
| GSE48662 | Up | 0.5246372051 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Adenosine-5'-Diphosphate Monothiophosphate | DB01660 | EXPT02847 |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018882 | Microarray | Functional MTI (Weak) | 18185580 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 18358537 | An OBGF400 neuronal phenotype was indicated by the recognition of a transfected neuronal progenitor-cell-specific tubulin-alpha1 gene promoter, intracellular presence of early neuronal markers (TuJ1, neuregulin-1, doublecortin and SOX2) and enhanced expression of neuronal- and progenitor lineage-active genes (MAP2, nestin, ENO and Syn1) compared to that of porcine epithelial cells |
Entries Per Page
Displaying Page of
