HCSGD entry for VAMP1

1. General information

Official gene symbolVAMP1
Entrez ID6843
Gene full namevesicle-associated membrane protein 1 (synaptobrevin 1)
Other gene symbolsSYB1 VAMP-1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000149SNARE bindingIBAmolecular_function
GO:0005484SNAP receptor activityIBAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005741Mitochondrial outer membraneIEAcellular_component
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0006906Vesicle fusionIBAbiological_process
GO:0007268Synaptic transmissionTASbiological_process
GO:0007269Neurotransmitter secretionTASbiological_process
GO:0008021Synaptic vesicleIBAcellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0016192Vesicle-mediated transportIEAbiological_process
GO:0017157Regulation of exocytosisIBAbiological_process
GO:0030054Cell junctionIEAcellular_component
GO:0030666Endocytic vesicle membraneTAScellular_component
GO:0030672Synaptic vesicle membraneIEAcellular_component
GO:0031201SNARE complexIBAcellular_component
GO:0043005Neuron projectionIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.03982322100.86947376240.44816332191.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1156210598
GSE13712_SHEARDown-0.3871799551
GSE13712_STATICDown-0.4084265422
GSE19018Down-0.0307950589
GSE19899_A1Up0.0675157988
GSE19899_A2Up0.5440156757
PubMed_21979375_A1Up0.3111815978
PubMed_21979375_A2Up0.3935458335
GSE35957Up0.0917829078
GSE36640Up1.6705159270
GSE54402Down-0.2340550590
GSE9593Up0.3544792053
GSE43922Up0.0851477130
GSE24585Up0.9178753882
GSE37065Up0.0858478261
GSE28863_A1Up0.4027545490
GSE28863_A2Up0.0532953421
GSE28863_A3Down-0.2569512573
GSE28863_A4Up0.0821636985
GSE48662Up0.1102914461

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

Botulinum Toxin Type BDB00042 BTD00070 | BIOD00070

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.