HCSGD entry for STK4
1. General information
| Official gene symbol | STK4 |
|---|---|
| Entrez ID | 6789 |
| Gene full name | serine/threonine kinase 4 |
| Other gene symbols | KRS2 MST1 TIIAC YSK3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000287 | Magnesium ion binding | IDA | molecular_function |
| GO:0000902 | Cell morphogenesis | IDA | biological_process |
| GO:0001569 | Patterning of blood vessels | IEA | biological_process |
| GO:0001841 | Neural tube formation | IEA | biological_process |
| GO:0003157 | Endocardium development | IEA | biological_process |
| GO:0004674 | Protein serine/threonine kinase activity | EXP IDA IEA | molecular_function |
| GO:0004702 | Receptor signaling protein serine/threonine kinase activity | IBA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IDA IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006468 | Protein phosphorylation | IDA | biological_process |
| GO:0006915 | Apoptotic process | IDA | biological_process |
| GO:0007165 | Signal transduction | IEA TAS | biological_process |
| GO:0007417 | Central nervous system development | IEA | biological_process |
| GO:0008134 | Transcription factor binding | IPI | molecular_function |
| GO:0008285 | Negative regulation of cell proliferation | IEA | biological_process |
| GO:0018105 | Peptidyl-serine phosphorylation | IDA | biological_process |
| GO:0023014 | Signal transduction by phosphorylation | IBA | biological_process |
| GO:0030216 | Keratinocyte differentiation | IEA | biological_process |
| GO:0035329 | Hippo signaling | IDA TAS | biological_process |
| GO:0035556 | Intracellular signal transduction | IDA | biological_process |
| GO:0042325 | Regulation of phosphorylation | TAS | biological_process |
| GO:0042327 | Positive regulation of phosphorylation | TAS | biological_process |
| GO:0042802 | Identical protein binding | IPI | molecular_function |
| GO:0042803 | Protein homodimerization activity | IDA | molecular_function |
| GO:0043065 | Positive regulation of apoptotic process | IDA | biological_process |
| GO:0043085 | Positive regulation of catalytic activity | TAS | biological_process |
| GO:0043539 | Protein serine/threonine kinase activator activity | TAS | molecular_function |
| GO:0045859 | Regulation of protein kinase activity | TAS | biological_process |
| GO:0045860 | Positive regulation of protein kinase activity | TAS | biological_process |
| GO:0046621 | Negative regulation of organ growth | IEA | biological_process |
| GO:0046777 | Protein autophosphorylation | IDA | biological_process |
| GO:0046983 | Protein dimerization activity | IDA | molecular_function |
| GO:0050790 | Regulation of catalytic activity | TAS | biological_process |
| GO:0060215 | Primitive hemopoiesis | IEA | biological_process |
| GO:0060706 | Cell differentiation involved in embryonic placenta development | IEA | biological_process |
| GO:0071902 | Positive regulation of protein serine/threonine kinase activity | TAS | biological_process |
| GO:0090090 | Negative regulation of canonical Wnt signaling pathway | IMP | biological_process |
| GO:0097284 | Hepatocyte apoptotic process | IEA | biological_process |
| GO:1902043 | Positive regulation of extrinsic apoptotic signaling pathway via death domain receptors | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0120025379 | 0.9905320619 | 0.2739097920 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1472703335 |
| GSE13712_SHEAR | Up | 0.3504152787 |
| GSE13712_STATIC | Up | 0.0454671145 |
| GSE19018 | Down | -0.0888235857 |
| GSE19899_A1 | Up | 0.5281915505 |
| GSE19899_A2 | Up | 0.6460173436 |
| PubMed_21979375_A1 | Up | 1.0649568792 |
| PubMed_21979375_A2 | Up | 1.0980602021 |
| GSE35957 | Down | -0.0596876461 |
| GSE36640 | Down | -0.1424200774 |
| GSE54402 | Up | 0.6426895913 |
| GSE9593 | Up | 0.0782948298 |
| GSE43922 | Up | 0.8713325246 |
| GSE24585 | Up | 0.1721679831 |
| GSE37065 | Up | 0.1574210223 |
| GSE28863_A1 | Up | 0.1810278978 |
| GSE28863_A2 | Up | 0.3684990245 |
| GSE28863_A3 | Down | -0.3244759446 |
| GSE28863_A4 | Up | 0.0353511582 |
| GSE48662 | Up | 0.2553112276 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | MIRT002541 | Microarray//Microarray;Other | Functional MTI (Weak) | 15685193 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT048938 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | NA | hsa-miR-373 | 15685193 |
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