HCSGD entry for STAU1
1. General information
| Official gene symbol | STAU1 |
|---|---|
| Entrez ID | 6780 |
| Gene full name | staufen double-stranded RNA binding protein 1 |
| Other gene symbols | STAU |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003725 | Double-stranded RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005791 | Rough endoplasmic reticulum | IEA | cellular_component |
| GO:0005875 | Microtubule associated complex | TAS | cellular_component |
| GO:0008157 | Protein phosphatase 1 binding | IEA | molecular_function |
| GO:0008298 | Intracellular mRNA localization | IEA | biological_process |
| GO:0010494 | Cytoplasmic stress granule | ISS | cellular_component |
| GO:0043005 | Neuron projection | IEA | cellular_component |
| GO:0043025 | Neuronal cell body | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5486483758 | 0.7855043311 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1005562198 |
| GSE13712_SHEAR | Down | -0.3408869654 |
| GSE13712_STATIC | Down | -0.2184578960 |
| GSE19018 | Up | 0.0158628080 |
| GSE19899_A1 | Up | 0.1879573634 |
| GSE19899_A2 | Up | 0.2632696962 |
| PubMed_21979375_A1 | Up | 0.4041977764 |
| PubMed_21979375_A2 | Up | 0.3110469366 |
| GSE35957 | Down | -0.0394151151 |
| GSE36640 | Down | -0.0912176418 |
| GSE54402 | Up | 0.1526404500 |
| GSE9593 | Up | 0.0179595395 |
| GSE43922 | Up | 0.0037903915 |
| GSE24585 | Up | 0.2093423419 |
| GSE37065 | Down | -0.0287454563 |
| GSE28863_A1 | Up | 0.2316282790 |
| GSE28863_A2 | Up | 0.0741607733 |
| GSE28863_A3 | Down | -0.3412861005 |
| GSE28863_A4 | Up | 0.1015778375 |
| GSE48662 | Down | -0.0818526692 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-132-3p | MIMAT0000426 | MIRT021842 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-27a-3p | MIMAT0000084 | MIRT028692 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031669 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037250 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30e-5p | MIMAT0000692 | MIRT044157 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
