HCSGD entry for SRP9
1. General information
| Official gene symbol | SRP9 |
|---|---|
| Entrez ID | 6726 |
| Gene full name | signal recognition particle 9kDa |
| Other gene symbols | ALURBP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | TAS | molecular_function |
| GO:0005047 | Signal recognition particle binding | TAS | molecular_function |
| GO:0005785 | Signal recognition particle receptor complex | TAS | cellular_component |
| GO:0005786 | Signal recognition particle, endoplasmic reticulum targeting | NAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006412 | Translation | TAS | biological_process |
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEA TAS | biological_process |
| GO:0008312 | 7S RNA binding | IEA | molecular_function |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0045900 | Negative regulation of translational elongation | IEA | biological_process |
| GO:0048500 | Signal recognition particle | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9892658258 | 0.0203962084 | 0.9999902473 | 0.2762988163 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0084546116 |
| GSE13712_SHEAR | Down | -0.1237370342 |
| GSE13712_STATIC | Down | -0.1177138745 |
| GSE19018 | Down | -0.0553065123 |
| GSE19899_A1 | Up | 0.0891939002 |
| GSE19899_A2 | Down | -0.1647001388 |
| PubMed_21979375_A1 | Down | -0.3903675367 |
| PubMed_21979375_A2 | Down | -0.0539127283 |
| GSE35957 | Down | -0.2216435280 |
| GSE36640 | Down | -0.3663726280 |
| GSE54402 | Down | -0.0234768487 |
| GSE9593 | Down | -0.1550043292 |
| GSE43922 | Down | -0.1767771165 |
| GSE24585 | Up | 0.0634224177 |
| GSE37065 | Down | -0.1960866256 |
| GSE28863_A1 | Down | -0.7548889764 |
| GSE28863_A2 | Down | -0.8492157388 |
| GSE28863_A3 | Down | -0.5550477960 |
| GSE28863_A4 | Up | 0.0998810335 |
| GSE48662 | Down | -0.4055133083 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029418 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036946 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-421 | MIMAT0003339 | MIRT039405 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040748 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048202 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
