HCSGD entry for SOX12

1. General information

Official gene symbolSOX12
Entrez ID6666
Gene full nameSRY (sex determining region Y)-box 12
Other gene symbolsSOX22
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000976Transcription regulatory region sequence-specific DNA bindingISSmolecular_function
GO:0001077RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcriptionISSmolecular_function
GO:0001105RNA polymerase II transcription coactivator activityISSmolecular_function
GO:0003677DNA bindingNASmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0005634NucleusIEAcellular_component
GO:0006357Regulation of transcription from RNA polymerase II promoterNASbiological_process
GO:0006366Transcription from RNA polymerase II promoterISSbiological_process
GO:0021510Spinal cord developmentISSbiological_process
GO:0032993Protein-DNA complexIEAcellular_component
GO:0045165Cell fate commitmentIEPbiological_process
GO:0045944Positive regulation of transcription from RNA polymerase II promoterISSbiological_process
GO:0065004Protein-DNA complex assemblyIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.93025766880.09611817560.99999024730.5912424632

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.2495463896
GSE13712_SHEARUp0.1283185211
GSE13712_STATICDown-0.0544203187
GSE19018Up0.5155431227
GSE19899_A1Down-0.0985801429
GSE19899_A2Up0.1104514954
PubMed_21979375_A1Down-0.5871041892
PubMed_21979375_A2Down-0.3879086118
GSE35957Down-0.1935115387
GSE36640Down-0.2702984911
GSE54402Down-0.4110729337
GSE9593Down-0.3388355488
GSE43922Up0.0555886934
GSE24585Down-0.2803588778
GSE37065Down-0.1939036771
GSE28863_A1Down-0.1732727049
GSE28863_A2Down-0.0904682502
GSE28863_A3Up0.3577136741
GSE28863_A4Up0.0371664276
GSE48662Down-0.0613628114

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.