HCSGD entry for SNAPC3
1. General information
| Official gene symbol | SNAPC3 |
|---|---|
| Entrez ID | 6619 |
| Gene full name | small nuclear RNA activating complex, polypeptide 3, 50kDa |
| Other gene symbols | PTFbeta SNAP50 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0006383 | Transcription from RNA polymerase III promoter | TAS | biological_process |
| GO:0009301 | SnRNA transcription | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0747924737 | 0.9732430759 | 0.5797844660 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0892385687 |
| GSE13712_SHEAR | Up | 0.4238369220 |
| GSE13712_STATIC | Up | 0.4145993481 |
| GSE19018 | Up | 0.1634228469 |
| GSE19899_A1 | Up | 0.1024018125 |
| GSE19899_A2 | Up | 0.2107090099 |
| PubMed_21979375_A1 | Up | 0.3465271207 |
| PubMed_21979375_A2 | Up | 0.1833618912 |
| GSE35957 | Up | 0.1873999582 |
| GSE36640 | Up | 0.5483175565 |
| GSE54402 | Up | 0.0360480197 |
| GSE9593 | Up | 0.4106590242 |
| GSE43922 | Up | 0.1083355095 |
| GSE24585 | Up | 0.2479344156 |
| GSE37065 | Up | 0.1318156228 |
| GSE28863_A1 | Up | 0.0412343258 |
| GSE28863_A2 | Down | -0.0153884956 |
| GSE28863_A3 | Down | -0.2093576173 |
| GSE28863_A4 | Up | 0.1215443894 |
| GSE48662 | Down | -0.1357829111 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
