HCSGD entry for BRD9

1. General information

Official gene symbolBRD9
Entrez ID65980
Gene full namebromodomain containing 9
Other gene symbolsLAVS3040 PRO9856
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003676Nucleic acid bindingNASmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0008150Biological_processNDbiological_process
GO:0016568Chromatin modificationIEAbiological_process
GO:0070577Histone acetyl-lysine bindingIDAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.70843839140.35333456180.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0092537726
GSE13712_SHEARUp0.0347115188
GSE13712_STATICDown-0.1713063529
GSE19018Down-0.5354738152
GSE19899_A1Down-0.1586284790
GSE19899_A2Up0.0289719109
PubMed_21979375_A1Up0.5879537073
PubMed_21979375_A2Up0.2059490675
GSE35957Down-0.2515147903
GSE36640Down-0.5489739140
GSE54402Up0.2484329585
GSE9593Down-0.3275680268
GSE43922Up0.0410886991
GSE24585Down-0.0896564134
GSE37065Down-0.0920661257
GSE28863_A1Up0.0657128724
GSE28863_A2Up0.1235739948
GSE28863_A3Up0.1497663541
GSE28863_A4Up0.0770301480
GSE48662Up0.2026615023

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.