HCSGD entry for SLC10A2

1. General information

Official gene symbolSLC10A2
Entrez ID6555
Gene full namesolute carrier family 10 (sodium/bile acid cotransporter family), member 2
Other gene symbolsASBT IBAT ISBT NTCP2 PBAM
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000502Proteasome complexIEAcellular_component
GO:0005634NucleusIEAcellular_component
GO:0005886Plasma membraneTAScellular_component
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0006810TransportTASbiological_process
GO:0006869Lipid transportTASbiological_process
GO:0008206Bile acid metabolic processTASbiological_process
GO:0008508Bile acid:sodium symporter activityIEAmolecular_function
GO:0015721Bile acid and bile salt transportTASbiological_process
GO:0016324Apical plasma membraneIEAcellular_component
GO:0034220Ion transmembrane transportTASbiological_process
GO:0035725Sodium ion transmembrane transportTASbiological_process
GO:0044281Small molecule metabolic processTASbiological_process
GO:0055085Transmembrane transportTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.60581360130.88549985180.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0017190661
GSE13712_SHEARDown-0.0044906849
GSE13712_STATICUp0.0629845115
GSE19018Down-0.1564970646
GSE19899_A1Up0.1583380002
GSE19899_A2Up0.1123749295
PubMed_21979375_A1Up0.1567744065
PubMed_21979375_A2Down-0.0121820253
GSE35957Up0.1628556180
GSE36640Down-0.0190956893
GSE54402Down-0.0255951668
GSE9593Up0.0162019782
GSE43922Up0.1539952787
GSE24585Up0.0195887331
GSE37065Up0.0413851023
GSE28863_A1Down-0.0697402283
GSE28863_A2Down-0.0127318531
GSE28863_A3Up0.1093299313
GSE28863_A4Up0.0550525540
GSE48662Down-0.0338832196

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.