HCSGD entry for SLC10A1
1. General information
| Official gene symbol | SLC10A1 |
|---|---|
| Entrez ID | 6554 |
| Gene full name | solute carrier family 10 (sodium/bile acid cotransporter family), member 1 |
| Other gene symbols | NTCP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0006869 | Lipid transport | TAS | biological_process |
| GO:0008206 | Bile acid metabolic process | TAS | biological_process |
| GO:0008508 | Bile acid:sodium symporter activity | IEA | molecular_function |
| GO:0015721 | Bile acid and bile salt transport | TAS | biological_process |
| GO:0016323 | Basolateral plasma membrane | IEA | cellular_component |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0035725 | Sodium ion transmembrane transport | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6243481441 | 0.6276617720 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2530284295 |
| GSE13712_SHEAR | Down | -0.1395509734 |
| GSE13712_STATIC | Down | -0.0929681404 |
| GSE19018 | Up | 0.2899557367 |
| GSE19899_A1 | Up | 0.0171590946 |
| GSE19899_A2 | Up | 0.0680563481 |
| PubMed_21979375_A1 | Down | -0.4741118100 |
| PubMed_21979375_A2 | Down | -0.0460967281 |
| GSE35957 | Up | 0.2020495948 |
| GSE36640 | Up | 0.0746443386 |
| GSE54402 | Down | -0.1943784105 |
| GSE9593 | Up | 0.0492942239 |
| GSE43922 | Up | 0.0162134202 |
| GSE24585 | Down | -0.3004519673 |
| GSE37065 | Down | -0.0367860857 |
| GSE28863_A1 | Up | 0.0392907204 |
| GSE28863_A2 | Up | 0.0334043063 |
| GSE28863_A3 | Up | 0.1417150872 |
| GSE28863_A4 | Down | -0.0358901973 |
| GSE48662 | Up | 0.1667104363 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
