HCSGD entry for SMTN
1. General information
| Official gene symbol | SMTN |
|---|---|
| Entrez ID | 6525 |
| Gene full name | smoothelin |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | TAS | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | TAS | cellular_component |
| GO:0006939 | Smooth muscle contraction | TAS | biological_process |
| GO:0007517 | Muscle organ development | TAS | biological_process |
| GO:0008307 | Structural constituent of muscle | TAS | molecular_function |
| GO:0015629 | Actin cytoskeleton | TAS | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0071935717 | 0.9120099046 | 0.2211354726 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3282981704 |
| GSE13712_SHEAR | Up | 0.2284979167 |
| GSE13712_STATIC | Up | 0.1919143032 |
| GSE19018 | Down | -0.2532525342 |
| GSE19899_A1 | Up | 0.5568377912 |
| GSE19899_A2 | Up | 1.0724440665 |
| PubMed_21979375_A1 | Up | 1.3378367665 |
| PubMed_21979375_A2 | Up | 1.8724455286 |
| GSE35957 | Down | -0.6909298269 |
| GSE36640 | Down | -0.1172542368 |
| GSE54402 | Up | 0.8445990727 |
| GSE9593 | Down | -0.6715090703 |
| GSE43922 | Up | 0.6595492259 |
| GSE24585 | Down | -0.0236960246 |
| GSE37065 | Down | -0.0495362813 |
| GSE28863_A1 | Down | -0.0232820676 |
| GSE28863_A2 | Up | 0.2020177214 |
| GSE28863_A3 | Up | 0.4300741470 |
| GSE28863_A4 | Up | 0.1669065773 |
| GSE48662 | Up | 0.0796647320 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 2 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 27524942 | Expression of the smooth muscle markers- alpha smooth muscle actin and smoothelin was the highest for cells isolated by enzymatic method I and cultured in SmGM-2 |
| 12135889 | Telomerase-expressing cells contained mRNA for alpha smooth muscle actin, smoothelin, oxytocin receptor, and estrogen receptor alpha, but the estrogen receptor beta receptor was lost |
Entries Per Page
Displaying Page of
