HCSGD entry for SPATS2
1. General information
| Official gene symbol | SPATS2 |
|---|---|
| Entrez ID | 65244 |
| Gene full name | spermatogenesis associated, serine-rich 2 |
| Other gene symbols | P59SCR SCR59 SPATA10 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0235259223 | 0.8884255006 | 0.3642504706 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3954577793 |
| GSE13712_SHEAR | Up | 0.6192738080 |
| GSE13712_STATIC | Up | 0.7022417029 |
| GSE19018 | Up | 1.0298392556 |
| GSE19899_A1 | Up | 0.2155540976 |
| GSE19899_A2 | Up | 0.5282504125 |
| PubMed_21979375_A1 | Up | 0.1218451616 |
| PubMed_21979375_A2 | Up | 0.0151888626 |
| GSE35957 | Down | -0.3668422664 |
| GSE36640 | Up | 0.3782800790 |
| GSE54402 | Up | 0.2187005940 |
| GSE9593 | Up | 0.0855495391 |
| GSE43922 | Up | 0.0468026899 |
| GSE24585 | Up | 0.4620256154 |
| GSE37065 | Down | -0.2040182813 |
| GSE28863_A1 | Down | -0.0432926430 |
| GSE28863_A2 | Down | -0.2718333084 |
| GSE28863_A3 | Down | -0.7439391214 |
| GSE28863_A4 | Up | 0.0776259439 |
| GSE48662 | Up | 0.0548808401 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-590-3p | MIMAT0004801 | MIRT016175 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT026989 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038487 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052478 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
