HCSGD entry for SLC4A2
1. General information
| Official gene symbol | SLC4A2 |
|---|---|
| Entrez ID | 6522 |
| Gene full name | solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1) |
| Other gene symbols | AE2 BND3L EPB3L1 HKB3 NBND3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005452 | Inorganic anion exchanger activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006811 | Ion transport | TAS | biological_process |
| GO:0006820 | Anion transport | TAS | biological_process |
| GO:0008509 | Anion transmembrane transporter activity | TAS | molecular_function |
| GO:0015108 | Chloride transmembrane transporter activity | IEA | molecular_function |
| GO:0015701 | Bicarbonate transport | TAS | biological_process |
| GO:0016020 | Membrane | TAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016323 | Basolateral plasma membrane | IEA | cellular_component |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0918110178 | 0.1974182896 | 0.6376511732 | 0.8599953200 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1810512754 |
| GSE13712_SHEAR | Down | -0.3673540764 |
| GSE13712_STATIC | Down | -0.0800108761 |
| GSE19018 | Down | -0.6523857940 |
| GSE19899_A1 | Down | -0.1434872863 |
| GSE19899_A2 | Up | 0.5772600784 |
| PubMed_21979375_A1 | Up | 0.5203666523 |
| PubMed_21979375_A2 | Up | 1.5756960042 |
| GSE35957 | Down | -0.0292156364 |
| GSE36640 | Up | 0.5436096649 |
| GSE54402 | Up | 0.4579981472 |
| GSE9593 | Up | 0.0723062490 |
| GSE43922 | Up | 0.0647928858 |
| GSE24585 | Up | 0.0740916297 |
| GSE37065 | Up | 0.0688743366 |
| GSE28863_A1 | Down | -0.2016077207 |
| GSE28863_A2 | Up | 0.0760227468 |
| GSE28863_A3 | Down | -0.4753188218 |
| GSE28863_A4 | Down | -0.4666999222 |
| GSE48662 | Up | 0.4224850637 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-455-3p | MIMAT0004784 | MIRT037902 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040471 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042083 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049380 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051300 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
