HCSGD entry for PCDH15

1. General information

Official gene symbolPCDH15
Entrez ID65217
Gene full nameprotocadherin-related 15
Other gene symbolsCDHR15 DFNB23 USH1F
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001750Photoreceptor outer segmentIDA IEAcellular_component
GO:0001964Startle responseIEAbiological_process
GO:0002009Morphogenesis of an epitheliumIEAbiological_process
GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005576Extracellular regionIEAcellular_component
GO:0005615Extracellular spaceIDAcellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0005886Plasma membraneIEAcellular_component
GO:0007015Actin filament organizationIEAbiological_process
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0007605Sensory perception of soundIMPbiological_process
GO:0007628Adult walking behaviorIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0032420StereociliumIEA ISScellular_component
GO:0035058Nonmotile primary cilium assemblyIEAbiological_process
GO:0035264Multicellular organism growthIEAbiological_process
GO:0045202SynapseIDAcellular_component
GO:0045494Photoreceptor cell maintenanceIMPbiological_process
GO:0050910Detection of mechanical stimulus involved in sensory perception of soundIEAbiological_process
GO:0050953Sensory perception of light stimulusIMPbiological_process
GO:0050957EquilibrioceptionIMPbiological_process
GO:0050973Detection of mechanical stimulus involved in equilibrioceptionIEAbiological_process
GO:0060013Righting reflexIEAbiological_process
GO:0060088Auditory receptor cell stereocilium organizationIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.77579761410.85774042400.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0262562436
GSE13712_SHEARUp0.0933582929
GSE13712_STATICDown-0.0704637726
GSE19018Up0.0652944750
GSE19899_A1Up0.0711462804
GSE19899_A2Up0.0101371977
PubMed_21979375_A1Down-0.0936630890
PubMed_21979375_A2Up0.1521271835
GSE35957Up0.1061199248
GSE36640Up0.0206453256
GSE54402Up0.0077201636
GSE9593Up0.1300610704
GSE43922Up0.0191703173
GSE24585Down-0.0515733926
GSE37065Down-0.0005859749
GSE28863_A1Down-0.0400428844
GSE28863_A2Up0.0143002993
GSE28863_A3Up0.0887036122
GSE28863_A4Down-0.0325860323
GSE48662Up0.0182810416

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.