HCSGD entry for REEP1
1. General information
| Official gene symbol | REEP1 |
|---|---|
| Entrez ID | 65055 |
| Gene full name | receptor accessory protein 1 |
| Other gene symbols | C2orf23 HMN5B SPG31 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0008017 | Microtubule binding | IDA | molecular_function |
| GO:0008219 | Cell death | IEA | biological_process |
| GO:0016020 | Membrane | IDA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031849 | Olfactory receptor binding | IMP | molecular_function |
| GO:0031966 | Mitochondrial membrane | IEA | cellular_component |
| GO:0051205 | Protein insertion into membrane | IDA | biological_process |
| GO:0071786 | Endoplasmic reticulum tubular network organization | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6801342882 | 0.4480177729 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2367306521 |
| GSE13712_SHEAR | Down | -0.2881338359 |
| GSE13712_STATIC | Down | -0.4849394088 |
| GSE19018 | Up | 0.2706304362 |
| GSE19899_A1 | Up | 0.0497379740 |
| GSE19899_A2 | Down | -0.0655057478 |
| PubMed_21979375_A1 | Down | -0.3329739507 |
| PubMed_21979375_A2 | Down | -0.0384653755 |
| GSE35957 | Up | 0.0464022533 |
| GSE36640 | Down | -0.1162535483 |
| GSE54402 | Down | -0.1138260200 |
| GSE9593 | Up | 0.2620182740 |
| GSE43922 | Up | 0.0158187929 |
| GSE24585 | Down | -0.3205653590 |
| GSE37065 | Up | 0.1728445336 |
| GSE28863_A1 | Up | 0.1004244209 |
| GSE28863_A2 | Down | -0.0425871549 |
| GSE28863_A3 | Up | 0.1229571601 |
| GSE28863_A4 | Down | -0.0123756002 |
| GSE48662 | Down | -0.0322576491 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024594 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026266 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
