HCSGD entry for MRPL40
1. General information
| Official gene symbol | MRPL40 |
|---|---|
| Entrez ID | 64976 |
| Gene full name | mitochondrial ribosomal protein L40 |
| Other gene symbols | MRP-L22 MRPL22 NLVCF URIM |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0005761 | Mitochondrial ribosome | IEA ISS | cellular_component |
| GO:0009653 | Anatomical structure morphogenesis | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9629644694 | 0.0537909236 | 0.9999902473 | 0.4369848457 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1929236281 |
| GSE13712_SHEAR | Up | 0.1758896064 |
| GSE13712_STATIC | Up | 0.2199800869 |
| GSE19018 | Down | -0.0344047749 |
| GSE19899_A1 | Down | -0.7417451623 |
| GSE19899_A2 | Down | -0.1947632842 |
| PubMed_21979375_A1 | Down | -0.0554432893 |
| PubMed_21979375_A2 | Down | -0.2608889439 |
| GSE35957 | Down | -0.4100604513 |
| GSE36640 | Down | -0.6739812094 |
| GSE54402 | Down | -0.2170185901 |
| GSE9593 | Down | -0.2774389907 |
| GSE43922 | Down | -0.0650747665 |
| GSE24585 | Down | -0.1354947508 |
| GSE37065 | Down | -0.0213651351 |
| GSE28863_A1 | Down | -0.1233025788 |
| GSE28863_A2 | Down | -0.2394167641 |
| GSE28863_A3 | Down | -0.4771934131 |
| GSE28863_A4 | Up | 0.1298558347 |
| GSE48662 | Down | -0.0679247620 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-24-3p | MIMAT0000080 | MIRT030492 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050804 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
