HCSGD entry for NABP1
1. General information
| Official gene symbol | NABP1 |
|---|---|
| Entrez ID | 64859 |
| Gene full name | nucleic acid binding protein 1 |
| Other gene symbols | OBFC2A SOSS-B2 SSB2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000724 | Double-strand break repair via homologous recombination | IMP | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003697 | Single-stranded DNA binding | ISS | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006281 | DNA repair | IMP | biological_process |
| GO:0006974 | Cellular response to DNA damage stimulus | IMP | biological_process |
| GO:0007093 | Mitotic cell cycle checkpoint | IMP | biological_process |
| GO:0010212 | Response to ionizing radiation | IMP | biological_process |
| GO:0070876 | SOSS complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0085184491 | 0.7149819802 | 0.2370178270 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5434671307 |
| GSE13712_SHEAR | Up | 1.8064271765 |
| GSE13712_STATIC | Up | 1.1505501574 |
| GSE19018 | Down | -0.0429737249 |
| GSE19899_A1 | Up | 0.2188101612 |
| GSE19899_A2 | Up | 0.7292676486 |
| PubMed_21979375_A1 | Down | -0.0497410518 |
| PubMed_21979375_A2 | Up | 0.6593243738 |
| GSE35957 | Up | 0.6239197530 |
| GSE36640 | Up | 1.3774092268 |
| GSE54402 | Up | 0.3960408977 |
| GSE9593 | Up | 0.1279331630 |
| GSE43922 | Up | 0.0978026324 |
| GSE24585 | Down | -0.1016732219 |
| GSE37065 | Down | -0.4048088405 |
| GSE28863_A1 | Up | 0.0907882404 |
| GSE28863_A2 | Down | -0.3739176021 |
| GSE28863_A3 | Down | -0.3467986322 |
| GSE28863_A4 | Down | -0.3915655013 |
| GSE48662 | Up | 0.2248584294 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-17-5p | MIMAT0000070 | MIRT000259 | Luciferase reporter assay | Functional MTI | 19734348 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030004 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-26a-5p | MIMAT0000082 | MIRT050058 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
