HCSGD entry for FAM129B
1. General information
| Official gene symbol | FAM129B |
|---|---|
| Entrez ID | 64855 |
| Gene full name | family with sequence similarity 129, member B |
| Other gene symbols | C9orf88 MEG-3 MINERVA OC58 bA356B19.6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005829 | Cytosol | IDA | cellular_component |
| GO:0005912 | Adherens junction | IDA | cellular_component |
| GO:0043066 | Negative regulation of apoptotic process | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3817923977 | 0.3839340261 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0705681519 |
| GSE13712_SHEAR | Down | -0.1395844116 |
| GSE13712_STATIC | Down | -0.0284659450 |
| GSE19018 | Up | 0.1444009134 |
| GSE19899_A1 | Down | -0.0549951785 |
| GSE19899_A2 | Up | 0.2108370101 |
| PubMed_21979375_A1 | Down | -0.1628608896 |
| PubMed_21979375_A2 | Up | 0.4327883967 |
| GSE35957 | Up | 0.3460426214 |
| GSE36640 | Up | 0.3217548484 |
| GSE54402 | Up | 0.1734474208 |
| GSE9593 | Up | 0.4020488686 |
| GSE43922 | Down | -0.0300722879 |
| GSE24585 | Down | -0.9558251893 |
| GSE37065 | Down | -0.1473702428 |
| GSE28863_A1 | Up | 0.0106789806 |
| GSE28863_A2 | Up | 0.2405280346 |
| GSE28863_A3 | Down | -0.3321207972 |
| GSE28863_A4 | Down | -0.0322930199 |
| GSE48662 | Up | 0.1703032751 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT004925 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT032042 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-484 | MIMAT0002174 | MIRT041768 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049328 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
