HCSGD entry for YTHDC2
1. General information
| Official gene symbol | YTHDC2 |
|---|---|
| Entrez ID | 64848 |
| Gene full name | YTH domain containing 2 |
| Other gene symbols | CAHL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0008026 | ATP-dependent helicase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8663293454 | 0.1506281410 | 0.9999902473 | 0.7500346765 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0734751707 |
| GSE13712_SHEAR | Up | 0.0430978175 |
| GSE13712_STATIC | Down | -0.4965435863 |
| GSE19018 | Down | -0.0431187751 |
| GSE19899_A1 | Down | -0.0803348478 |
| GSE19899_A2 | Up | 0.2104051735 |
| PubMed_21979375_A1 | Down | -0.9858517496 |
| PubMed_21979375_A2 | Up | 0.4532153966 |
| GSE35957 | Up | 0.2012421383 |
| GSE36640 | Down | -0.2609001225 |
| GSE54402 | Down | -0.6563651172 |
| GSE9593 | Down | -0.1210957755 |
| GSE43922 | Up | 0.0084294679 |
| GSE24585 | Down | -0.1363218844 |
| GSE37065 | Down | -0.0989746431 |
| GSE28863_A1 | Up | 0.3729778392 |
| GSE28863_A2 | Up | 0.1675104243 |
| GSE28863_A3 | Down | -0.0930933474 |
| GSE28863_A4 | Down | -0.0947098180 |
| GSE48662 | Down | -0.2137479928 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-505-3p | MIMAT0002876 | MIRT041048 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047966 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT048734 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
