HCSGD entry for FNDC4
1. General information
| Official gene symbol | FNDC4 |
|---|---|
| Entrez ID | 64838 |
| Gene full name | fibronectin type III domain containing 4 |
| Other gene symbols | FRCP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005783 | Endoplasmic reticulum | ISS | cellular_component |
| GO:0005886 | Plasma membrane | ISS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1500060598 | 0.0776833479 | 0.7747113989 | 0.5275319659 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6855316009 |
| GSE13712_SHEAR | Down | -0.0759037301 |
| GSE13712_STATIC | Down | -0.2024137323 |
| GSE19018 | Down | -0.1275088704 |
| GSE19899_A1 | Down | -0.3515795206 |
| GSE19899_A2 | Up | 0.2254415562 |
| PubMed_21979375_A1 | Down | -1.0975746132 |
| PubMed_21979375_A2 | Down | -0.7364485751 |
| GSE35957 | Up | 0.8815785934 |
| GSE36640 | Up | 0.6787018082 |
| GSE54402 | Up | 0.7287360162 |
| GSE9593 | Up | 0.0022546608 |
| GSE43922 | Down | -0.3181448787 |
| GSE24585 | Up | 0.3071768716 |
| GSE37065 | Down | -0.1118777360 |
| GSE28863_A1 | Down | -0.4514520960 |
| GSE28863_A2 | Up | 0.2541446875 |
| GSE28863_A3 | Down | -0.3283095549 |
| GSE28863_A4 | Down | -0.3486888605 |
| GSE48662 | Up | 0.0931924243 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022409 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025717 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
