HCSGD entry for DDX31
1. General information
| Official gene symbol | DDX31 |
|---|---|
| Entrez ID | 64794 |
| Gene full name | DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 |
| Other gene symbols | PPP1R25 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0004386 | Helicase activity | IEA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005730 | Nucleolus | IEA | cellular_component |
| GO:0008026 | ATP-dependent helicase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1323736370 | 0.9163099274 | 0.7377187658 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2099714264 |
| GSE13712_SHEAR | Up | 0.0615485000 |
| GSE13712_STATIC | Up | 0.0983296505 |
| GSE19018 | Down | -0.3895618927 |
| GSE19899_A1 | Up | 0.0530942839 |
| GSE19899_A2 | Up | 0.6582601565 |
| PubMed_21979375_A1 | Up | 0.7893861368 |
| PubMed_21979375_A2 | Up | 0.5033539124 |
| GSE35957 | Down | -0.1628345921 |
| GSE36640 | Up | 0.1257075219 |
| GSE54402 | Up | 0.2284147996 |
| GSE9593 | Up | 0.2163684287 |
| GSE43922 | Up | 0.4179483126 |
| GSE24585 | Down | -0.2520508468 |
| GSE37065 | Down | -0.0158159830 |
| GSE28863_A1 | Down | -0.0411038223 |
| GSE28863_A2 | Down | -0.0215190430 |
| GSE28863_A3 | Down | -0.0952819190 |
| GSE28863_A4 | Up | 0.0982521142 |
| GSE48662 | Up | 0.0310667441 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT031816 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037156 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
