HCSGD entry for SMYD3
1. General information
| Official gene symbol | SMYD3 |
|---|---|
| Entrez ID | 64754 |
| Gene full name | SET and MYND domain containing 3 |
| Other gene symbols | KMT3E ZMYND1 ZNFN3A1 bA74P14.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0018022 | Peptidyl-lysine methylation | ISS | biological_process |
| GO:0018024 | Histone-lysine N-methyltransferase activity | IEA ISS | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0360544774 | 0.2194853729 | 0.4316536331 | 0.9016816763 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0440218795 |
| GSE13712_SHEAR | Down | -0.2517887263 |
| GSE13712_STATIC | Up | 0.0718111989 |
| GSE19018 | Up | 0.6180261586 |
| GSE19899_A1 | Up | 0.6043693564 |
| GSE19899_A2 | Up | 0.1616665275 |
| PubMed_21979375_A1 | Up | 0.1506199603 |
| PubMed_21979375_A2 | Up | 0.6576642997 |
| GSE35957 | Up | 1.8976083888 |
| GSE36640 | Down | -0.2979406362 |
| GSE54402 | Up | 0.0317596023 |
| GSE9593 | Up | 0.2340824454 |
| GSE43922 | Up | 0.5900458002 |
| GSE24585 | Down | -0.0597571773 |
| GSE37065 | Down | -0.7934345762 |
| GSE28863_A1 | Down | -0.4424620524 |
| GSE28863_A2 | Up | 0.4204998812 |
| GSE28863_A3 | Down | -0.2030715797 |
| GSE28863_A4 | Down | -0.3071743915 |
| GSE48662 | Down | -0.4793144731 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT004725 | Luciferase reporter assay//qRT-PCR//Western blot | Functional MTI | 19843643 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT004725 | Luciferase reporter assay | Functional MTI | 22819820 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
