HCSGD entry for ACBD3
1. General information
| Official gene symbol | ACBD3 |
|---|---|
| Entrez ID | 64746 |
| Gene full name | acyl-CoA binding domain containing 3 |
| Other gene symbols | GCP60 GOCAP1 GOLPH1 PAP7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000062 | Fatty-acyl-CoA binding | IEA | molecular_function |
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0006694 | Steroid biosynthetic process | IEA | biological_process |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0574883477 | 0.9563117131 | 0.5208685293 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0345551116 |
| GSE13712_SHEAR | Up | 0.4583092234 |
| GSE13712_STATIC | Up | 0.2250730829 |
| GSE19018 | Up | 0.1556225748 |
| GSE19899_A1 | Up | 0.4637548996 |
| GSE19899_A2 | Up | 0.7089165362 |
| PubMed_21979375_A1 | Up | 0.2508947225 |
| PubMed_21979375_A2 | Up | 0.4533433315 |
| GSE35957 | Down | -0.0378844105 |
| GSE36640 | Up | 0.1497089832 |
| GSE54402 | Up | 0.0453560507 |
| GSE9593 | Up | 0.3211020963 |
| GSE43922 | Up | 0.0912377274 |
| GSE24585 | Up | 0.4015312192 |
| GSE37065 | Up | 0.0476416894 |
| GSE28863_A1 | Down | -0.0223659822 |
| GSE28863_A2 | Up | 0.4492104590 |
| GSE28863_A3 | Down | -0.1239391569 |
| GSE28863_A4 | Down | -0.1086312901 |
| GSE48662 | Down | -0.6203276481 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018287 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029685 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037332 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-145-5p | MIMAT0000437 | NA | hsa-miR-145 | 19915607 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
