HCSGD entry for COPS7B
1. General information
| Official gene symbol | COPS7B |
|---|---|
| Entrez ID | 64708 |
| Gene full name | COP9 signalosome subunit 7B |
| Other gene symbols | CSN7B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IDA IEA | cellular_component |
| GO:0008180 | COP9 signalosome | IDA IEA | cellular_component |
| GO:0010388 | Cullin deneddylation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8883022188 | 0.4815492534 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0373048475 |
| GSE13712_SHEAR | Up | 0.0600414821 |
| GSE13712_STATIC | Up | 0.0607222167 |
| GSE19018 | Down | -0.1008302609 |
| GSE19899_A1 | Up | 0.1159416611 |
| GSE19899_A2 | Up | 0.0817948283 |
| PubMed_21979375_A1 | Down | -0.4292216494 |
| PubMed_21979375_A2 | Up | 0.3113909245 |
| GSE35957 | Down | -0.1218401170 |
| GSE36640 | Up | 0.0127908699 |
| GSE54402 | Up | 0.0328303081 |
| GSE9593 | Down | -0.1031506796 |
| GSE43922 | Up | 0.0399314329 |
| GSE24585 | Down | -0.1688367391 |
| GSE37065 | Down | -0.1871178231 |
| GSE28863_A1 | Down | -0.0498424260 |
| GSE28863_A2 | Up | 0.0781347603 |
| GSE28863_A3 | Down | -0.3011020801 |
| GSE28863_A4 | Down | -0.1426027858 |
| GSE48662 | Up | 0.0469534780 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30b-5p | MIMAT0000420 | MIRT023407 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028660 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031981 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-425-5p | MIMAT0003393 | MIRT039317 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
