HCSGD entry for LINGO3
1. General information
| Official gene symbol | LINGO3 |
|---|---|
| Entrez ID | 645191 |
| Gene full name | leucine rich repeat and Ig domain containing 3 |
| Other gene symbols | LERN2 LRRN6B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4339571217 | 0.3845501615 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0509086270 |
| GSE13712_SHEAR | Down | -0.0948050415 |
| GSE13712_STATIC | Down | -0.0106867180 |
| GSE19018 | Up | 0.0045911523 |
| GSE19899_A1 | Down | -0.0635110854 |
| GSE19899_A2 | Up | 0.0156580289 |
| PubMed_21979375_A1 | Down | -0.1581497267 |
| PubMed_21979375_A2 | Down | -0.1643248830 |
| GSE35957 | Up | 0.2995869426 |
| GSE36640 | Up | 0.0812189619 |
| GSE54402 | Down | -0.0035339024 |
| GSE9593 | Up | 0.0321075923 |
| GSE43922 | Up | 0.1138774462 |
| GSE24585 | Up | 0.3521410835 |
| GSE37065 | Down | -0.1457715717 |
| GSE28863_A1 | Up | 0.0597502732 |
| GSE28863_A2 | Down | -0.1487266492 |
| GSE28863_A3 | Down | -0.1497096777 |
| GSE28863_A4 | Up | 0.2532697130 |
| GSE48662 | Up | 0.0328494504 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018012 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
