HCSGD entry for SGCD
1. General information
| Official gene symbol | SGCD |
|---|---|
| Entrez ID | 6444 |
| Gene full name | sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) |
| Other gene symbols | 35DAG CMD1L DAGD SG-delta SGCDP SGD |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0007517 | Muscle organ development | TAS | biological_process |
| GO:0016010 | Dystrophin-associated glycoprotein complex | IDA | cellular_component |
| GO:0016012 | Sarcoglycan complex | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0042383 | Sarcolemma | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5158366513 | 0.0006891569 | 0.9999902473 | 0.0492915761 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6288077908 |
| GSE13712_SHEAR | Down | -0.0327907704 |
| GSE13712_STATIC | Up | 0.0339270241 |
| GSE19018 | Down | -0.6843001138 |
| GSE19899_A1 | Down | -0.7306593109 |
| GSE19899_A2 | Down | -3.4458425244 |
| PubMed_21979375_A1 | Down | -1.8188217623 |
| PubMed_21979375_A2 | Down | -1.7926915930 |
| GSE35957 | Up | 0.0410222955 |
| GSE36640 | Up | 3.1184879755 |
| GSE54402 | Down | -2.2978605671 |
| GSE9593 | Up | 0.7284837928 |
| GSE43922 | Down | -1.4421305987 |
| GSE24585 | Down | -0.1495598616 |
| GSE37065 | Up | 0.0425118455 |
| GSE28863_A1 | Down | -0.4693496610 |
| GSE28863_A2 | Down | -0.0225283708 |
| GSE28863_A3 | Up | 0.4641269281 |
| GSE28863_A4 | Down | -0.4597617724 |
| GSE48662 | Down | -0.0394336433 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018675 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
