HCSGD entry for SRSF5
1. General information
| Official gene symbol | SRSF5 |
|---|---|
| Entrez ID | 6430 |
| Gene full name | serine/arginine-rich splicing factor 5 |
| Other gene symbols | HRS SFRS5 SRP40 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0000398 | MRNA splicing, via spliceosome | TAS | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0006369 | Termination of RNA polymerase II transcription | TAS | biological_process |
| GO:0006376 | MRNA splice site selection | TAS | biological_process |
| GO:0006397 | MRNA processing | TAS | biological_process |
| GO:0006406 | MRNA export from nucleus | TAS | biological_process |
| GO:0008380 | RNA splicing | TAS | biological_process |
| GO:0009611 | Response to wounding | IEA | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0016607 | Nuclear speck | IEA ISS | cellular_component |
| GO:0031124 | MRNA 3'-end processing | TAS | biological_process |
| GO:0050733 | RS domain binding | IEA | molecular_function |
| GO:0051726 | Regulation of cell cycle | IEA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1427013867 | 0.8222844649 | 0.7572827593 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0152441142 |
| GSE13712_SHEAR | Up | 0.2258439556 |
| GSE13712_STATIC | Down | -0.1738967537 |
| GSE19018 | Down | -0.2120070111 |
| GSE19899_A1 | Up | 0.1755949082 |
| GSE19899_A2 | Up | 0.0538871622 |
| PubMed_21979375_A1 | Down | -0.0440806583 |
| PubMed_21979375_A2 | Down | -0.0851018143 |
| GSE35957 | Up | 0.4735960608 |
| GSE36640 | Down | -0.1222538884 |
| GSE54402 | Up | 0.1243725299 |
| GSE9593 | Down | -0.0632456873 |
| GSE43922 | Up | 0.0781845535 |
| GSE24585 | Up | 0.4696735504 |
| GSE37065 | Up | 0.0375807578 |
| GSE28863_A1 | Up | 0.4669249479 |
| GSE28863_A2 | Up | 0.0939815575 |
| GSE28863_A3 | Down | -0.4357704774 |
| GSE28863_A4 | Up | 0.3375814136 |
| GSE48662 | Up | 0.0051960253 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT023067 | Proteomics;Microarray | Non-Functional MTI (Weak) | 18668037 |
| hsa-miR-1 | MIMAT0000416 | MIRT024020 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1236-3p | MIMAT0005591 | MIRT036252 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049180 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
