HCSGD entry for SLC39A8
1. General information
| Official gene symbol | SLC39A8 |
|---|---|
| Entrez ID | 64116 |
| Gene full name | solute carrier family 39 (zinc transporter), member 8 |
| Other gene symbols | BIGM103 LZT-Hs6 ZIP8 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006829 | Zinc ion transport | IMP | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031090 | Organelle membrane | IDA | cellular_component |
| GO:0046873 | Metal ion transmembrane transporter activity | IEA | molecular_function |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0030398085 | 0.9149868356 | 0.1484430427 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2993842057 |
| GSE13712_SHEAR | Down | -0.4357765258 |
| GSE13712_STATIC | Down | -0.2939701208 |
| GSE19018 | Up | 0.0327230481 |
| GSE19899_A1 | Up | 0.1495886128 |
| GSE19899_A2 | Up | 1.1518698022 |
| PubMed_21979375_A1 | Up | 0.9803307192 |
| PubMed_21979375_A2 | Up | 0.4932305855 |
| GSE35957 | Up | 0.9895089629 |
| GSE36640 | Up | 0.7493312149 |
| GSE54402 | Down | -0.0337158410 |
| GSE9593 | Down | -0.0468984904 |
| GSE43922 | Up | 0.9490110553 |
| GSE24585 | Down | -0.0262168751 |
| GSE37065 | Up | 1.5504144313 |
| GSE28863_A1 | Up | 0.8183849063 |
| GSE28863_A2 | Up | 2.1656646977 |
| GSE28863_A3 | Up | 0.0009370329 |
| GSE28863_A4 | Down | -0.0738869729 |
| GSE48662 | Down | -0.4101374759 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024337 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026917 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-30c-1-3p | MIMAT0004674 | MIRT038538 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043292 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052741 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
