HCSGD entry for SMOC1
1. General information
| Official gene symbol | SMOC1 |
|---|---|
| Entrez ID | 64093 |
| Gene full name | SPARC related modular calcium binding 1 |
| Other gene symbols | OAS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001654 | Eye development | IMP | biological_process |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005604 | Basement membrane | IEA | cellular_component |
| GO:0007165 | Signal transduction | IEA | biological_process |
| GO:0010811 | Positive regulation of cell-substrate adhesion | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0030198 | Extracellular matrix organization | IEA | biological_process |
| GO:0045667 | Regulation of osteoblast differentiation | IMP | biological_process |
| GO:0050840 | Extracellular matrix binding | IEA | molecular_function |
| GO:0060173 | Limb development | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0074421033 | 0.8072389499 | 0.2256723502 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0312146268 |
| GSE13712_SHEAR | Up | 0.0674544248 |
| GSE13712_STATIC | Down | -0.0194167323 |
| GSE19018 | Down | -0.2803757077 |
| GSE19899_A1 | Up | 0.4801064099 |
| GSE19899_A2 | Up | 0.6444880723 |
| PubMed_21979375_A1 | Up | 2.0972758657 |
| PubMed_21979375_A2 | Up | 1.8731817098 |
| GSE35957 | Down | -0.2907672048 |
| GSE36640 | Down | -0.7713919359 |
| GSE54402 | Up | 0.2343868236 |
| GSE9593 | Down | -0.4713370536 |
| GSE43922 | Up | 2.1392182218 |
| GSE24585 | Up | 0.4842850852 |
| GSE37065 | Up | 0.9387591943 |
| GSE28863_A1 | Down | -0.1545468160 |
| GSE28863_A2 | Down | -0.1082204645 |
| GSE28863_A3 | Up | 0.2266641343 |
| GSE28863_A4 | Down | -0.0058627051 |
| GSE48662 | Up | 0.6531657880 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1260b | MIMAT0015041 | MIRT052734 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
