HCSGD entry for SECTM1
1. General information
| Official gene symbol | SECTM1 |
|---|---|
| Entrez ID | 6398 |
| Gene full name | secreted and transmembrane 1 |
| Other gene symbols | K12 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004871 | Signal transducer activity | IMP | molecular_function |
| GO:0005125 | Cytokine activity | TAS | molecular_function |
| GO:0005615 | Extracellular space | TAS | cellular_component |
| GO:0005794 | Golgi apparatus | TAS | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006955 | Immune response | TAS | biological_process |
| GO:0007165 | Signal transduction | IMP | biological_process |
| GO:0007498 | Mesoderm development | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0043123 | Positive regulation of I-kappaB kinase/NF-kappaB signaling | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0084624330 | 0.1302040424 | 0.2370178270 | 0.6943892626 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0535893557 |
| GSE13712_SHEAR | Up | 0.5339671062 |
| GSE13712_STATIC | Up | 1.3509981617 |
| GSE19018 | Up | 0.0825907751 |
| GSE19899_A1 | Down | -0.2152977155 |
| GSE19899_A2 | Down | -0.0330250688 |
| PubMed_21979375_A1 | Down | -0.5820895498 |
| PubMed_21979375_A2 | Down | -0.6119845700 |
| GSE35957 | Up | 0.5098683370 |
| GSE36640 | Up | 0.1770014574 |
| GSE54402 | Down | -0.3069252023 |
| GSE9593 | Up | 0.5214967734 |
| GSE43922 | Down | -0.8761231657 |
| GSE24585 | Up | 1.1777050311 |
| GSE37065 | Up | 0.7036620060 |
| GSE28863_A1 | Up | 1.2388545131 |
| GSE28863_A2 | Up | 1.6019015643 |
| GSE28863_A3 | Up | 0.1107271550 |
| GSE28863_A4 | Down | -0.2431220332 |
| GSE48662 | Down | -0.7728583209 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022533 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
