HCSGD entry for NEUROD6
1. General information
| Official gene symbol | NEUROD6 |
|---|---|
| Entrez ID | 63974 |
| Gene full name | neuronal differentiation 6 |
| Other gene symbols | Atoh2 MATH2 Math-2 NEX1M Nex1 bHLHa2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0021542 | Dentate gyrus development | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0046983 | Protein dimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5207634322 | 0.7091864937 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2274652748 |
| GSE13712_SHEAR | Up | 0.0466849716 |
| GSE13712_STATIC | Down | -0.0504221236 |
| GSE19018 | Up | 0.0999729155 |
| GSE19899_A1 | Up | 0.1087945854 |
| GSE19899_A2 | Up | 0.3268184050 |
| PubMed_21979375_A1 | Up | 0.0749005148 |
| PubMed_21979375_A2 | Down | -0.0989183299 |
| GSE35957 | Up | 0.2903405882 |
| GSE36640 | Up | 0.0846329668 |
| GSE54402 | Up | 0.1786000225 |
| GSE9593 | Down | -0.1421828011 |
| GSE43922 | Up | 0.0136828369 |
| GSE24585 | Up | 0.0617957025 |
| GSE37065 | Down | -0.0057152206 |
| GSE28863_A1 | Up | 0.0375652478 |
| GSE28863_A2 | Down | -0.1217282526 |
| GSE28863_A3 | Up | 0.3410775254 |
| GSE28863_A4 | Down | -0.0478091686 |
| GSE48662 | Down | -0.0759368121 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 15036409 | We expressed DsRed-tagged HMGI, MATH2, and MATH20 proteins in HeLa cells in a doxycycline dependent manner |
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