HCSGD entry for CHTF18
1. General information
| Official gene symbol | CHTF18 |
|---|---|
| Entrez ID | 63922 |
| Gene full name | CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) |
| Other gene symbols | C16orf41 C321D2.2 C321D2.3 C321D2.4 CHL12 Ctf18 RUVBL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006260 | DNA replication | IEA | biological_process |
| GO:0007049 | Cell cycle | IEA | biological_process |
| GO:0017111 | Nucleoside-triphosphatase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9686842331 | 0.0079703165 | 0.9999902473 | 0.1782256128 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1329388781 |
| GSE13712_SHEAR | Down | -0.2880501348 |
| GSE13712_STATIC | Down | -0.8214075333 |
| GSE19018 | Up | 0.0074274825 |
| GSE19899_A1 | Down | -0.0800562913 |
| GSE19899_A2 | Down | -1.1601256155 |
| PubMed_21979375_A1 | Down | -1.6858451997 |
| PubMed_21979375_A2 | Down | -0.7320736685 |
| GSE35957 | Down | -0.4847803480 |
| GSE36640 | Down | -1.2849274116 |
| GSE54402 | Up | 0.0973456281 |
| GSE9593 | Down | -0.7908874557 |
| GSE43922 | Up | 0.0529424615 |
| GSE24585 | Down | -0.1263333387 |
| GSE37065 | Down | -0.1372700093 |
| GSE28863_A1 | Down | -0.1000544176 |
| GSE28863_A2 | Up | 0.0866479044 |
| GSE28863_A3 | Up | 0.4005022581 |
| GSE28863_A4 | Up | 0.0846806086 |
| GSE48662 | Down | -1.2568357517 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016447 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-484 | MIMAT0002174 | MIRT042013 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-378a-5p | MIMAT0000731 | MIRT043987 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
