HCSGD entry for RNF123
1. General information
| Official gene symbol | RNF123 |
|---|---|
| Entrez ID | 63891 |
| Gene full name | ring finger protein 123 |
| Other gene symbols | KPC1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016567 | Protein ubiquitination | IEA | biological_process |
| GO:0016874 | Ligase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0253365906 | 0.9779748338 | 0.3736850420 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0380825359 |
| GSE13712_SHEAR | Down | -0.2182774399 |
| GSE13712_STATIC | Down | -0.0922533700 |
| GSE19018 | Up | 0.0893829217 |
| GSE19899_A1 | Up | 0.2132264078 |
| GSE19899_A2 | Up | 0.5108430516 |
| PubMed_21979375_A1 | Up | 1.8681292841 |
| PubMed_21979375_A2 | Up | 2.5420886538 |
| GSE35957 | Up | 0.1721994896 |
| GSE36640 | Up | 0.2025357060 |
| GSE54402 | Up | 0.1100342322 |
| GSE9593 | Down | -0.1831586858 |
| GSE43922 | Up | 0.2832343310 |
| GSE24585 | Up | 0.1631476899 |
| GSE37065 | Down | -0.0218679550 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.3386928605 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047567 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049325 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
