HCSGD entry for SDF2
1. General information
| Official gene symbol | SDF2 |
|---|---|
| Entrez ID | 6388 |
| Gene full name | stromal cell-derived factor 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004169 | Dolichyl-phosphate-mannose-protein mannosyltransferase activity | TAS | molecular_function |
| GO:0005615 | Extracellular space | TAS | cellular_component |
| GO:0006486 | Protein glycosylation | TAS | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0097502 | Mannosylation | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0077003305 | 0.9895165077 | 0.2280695163 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.7260790885 |
| GSE13712_SHEAR | Down | -0.0682984923 |
| GSE13712_STATIC | Up | 0.1078491214 |
| GSE19018 | Down | -0.0646001778 |
| GSE19899_A1 | Up | 0.8430748065 |
| GSE19899_A2 | Up | 0.8312530661 |
| PubMed_21979375_A1 | Up | 0.2771592031 |
| PubMed_21979375_A2 | Up | 0.6279272056 |
| GSE35957 | Down | -0.2805172846 |
| GSE36640 | Up | 1.2144581070 |
| GSE54402 | Up | 0.2706229655 |
| GSE9593 | Up | 0.0186939268 |
| GSE43922 | Up | 0.7867167552 |
| GSE24585 | Up | 0.3254777225 |
| GSE37065 | Up | 0.1787687982 |
| GSE28863_A1 | Up | 0.2067757266 |
| GSE28863_A2 | Up | 0.1562758541 |
| GSE28863_A3 | Down | -0.1184933849 |
| GSE28863_A4 | Up | 0.1045220389 |
| GSE48662 | Up | 0.2300632742 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Malonate Ion | DB02201 | EXPT02183 |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-132-3p | MIMAT0000426 | MIRT021848 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
