HCSGD entry for SRL
1. General information
| Official gene symbol | SRL |
|---|---|
| Entrez ID | 6345 |
| Gene full name | sarcalumenin |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003924 | GTPase activity | IEA | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0033018 | Sarcoplasmic reticulum lumen | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6921822423 | 0.5778096311 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0548592904 |
| GSE13712_SHEAR | Down | -0.3921924732 |
| GSE13712_STATIC | Down | -0.0006733536 |
| GSE19018 | Up | 0.0318248969 |
| GSE19899_A1 | Down | -0.1976951359 |
| GSE19899_A2 | Up | 0.3683168895 |
| PubMed_21979375_A1 | Down | -0.4747598031 |
| PubMed_21979375_A2 | Up | 0.0212420084 |
| GSE35957 | Up | 0.0262093991 |
| GSE36640 | Up | 0.0069707278 |
| GSE54402 | Down | -0.0286736300 |
| GSE9593 | Up | 0.1435835125 |
| GSE43922 | Up | 0.0193555333 |
| GSE24585 | Down | -0.0134950637 |
| GSE37065 | Up | 0.1113667349 |
| GSE28863_A1 | Down | -0.0756423848 |
| GSE28863_A2 | Down | -0.1046871043 |
| GSE28863_A3 | Up | 0.1610456423 |
| GSE28863_A4 | Up | 0.2195633690 |
| GSE48662 | Down | -0.0196726391 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017390 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040951 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
