HCSGD entry for SCNN1D
1. General information
| Official gene symbol | SCNN1D |
|---|---|
| Entrez ID | 6339 |
| Gene full name | sodium channel, non-voltage-gated 1, delta subunit |
| Other gene symbols | ENaCd ENaCdelta SCNED dNaCh |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005272 | Sodium channel activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006814 | Sodium ion transport | TAS | biological_process |
| GO:0015280 | Ligand-gated sodium channel activity | IEA | molecular_function |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0035725 | Sodium ion transmembrane transport | TAS | biological_process |
| GO:0050896 | Response to stimulus | IEA | biological_process |
| GO:0050909 | Sensory perception of taste | IEA | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8246532541 | 0.7820599445 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0796834088 |
| GSE13712_SHEAR | Up | 0.0888109589 |
| GSE13712_STATIC | Down | -0.0660586764 |
| GSE19018 | Down | -0.1353466087 |
| GSE19899_A1 | Up | 0.0073191565 |
| GSE19899_A2 | Up | 0.1001634728 |
| PubMed_21979375_A1 | Up | 0.2385522236 |
| PubMed_21979375_A2 | Down | -0.2506141941 |
| GSE35957 | Up | 0.0920737791 |
| GSE36640 | Down | -0.0851586093 |
| GSE54402 | Down | -0.0030782205 |
| GSE9593 | Down | -0.0239207709 |
| GSE43922 | Up | 0.1320039969 |
| GSE24585 | Up | 0.0209233376 |
| GSE37065 | Up | 0.0384684200 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.0570168387 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017326 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
