HCSGD entry for SAA1
1. General information
| Official gene symbol | SAA1 |
|---|---|
| Entrez ID | 6288 |
| Gene full name | serum amyloid A1 |
| Other gene symbols | PIG4 SAA SAA2 TP53I4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001664 | G-protein coupled receptor binding | IDA | molecular_function |
| GO:0005576 | Extracellular region | NAS TAS | cellular_component |
| GO:0006953 | Acute-phase response | IEA NAS | biological_process |
| GO:0007204 | Positive regulation of cytosolic calcium ion concentration | IDA NAS | biological_process |
| GO:0030168 | Platelet activation | NAS | biological_process |
| GO:0030593 | Neutrophil chemotaxis | NAS | biological_process |
| GO:0034364 | High-density lipoprotein particle | IEA | cellular_component |
| GO:0045087 | Innate immune response | TAS | biological_process |
| GO:0045785 | Positive regulation of cell adhesion | IDA NAS | biological_process |
| GO:0048246 | Macrophage chemotaxis | IDA | biological_process |
| GO:0048247 | Lymphocyte chemotaxis | IDA | biological_process |
| GO:0050708 | Regulation of protein secretion | NAS | biological_process |
| GO:0050715 | Positive regulation of cytokine secretion | IDA | biological_process |
| GO:0050716 | Positive regulation of interleukin-1 secretion | NAS | biological_process |
| GO:0050728 | Negative regulation of inflammatory response | NAS | biological_process |
| GO:0071682 | Endocytic vesicle lumen | TAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3093157213 | 0.9406988108 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | - | - |
| GSE13712_SHEAR | - | - |
| GSE13712_STATIC | - | - |
| GSE19018 | - | - |
| GSE19899_A1 | - | - |
| GSE19899_A2 | - | - |
| PubMed_21979375_A1 | - | - |
| PubMed_21979375_A2 | - | - |
| GSE35957 | - | - |
| GSE36640 | - | - |
| GSE54402 | - | - |
| GSE9593 | - | - |
| GSE43922 | Up | 0.2739724269 |
| GSE24585 | Down | -0.1368115939 |
| GSE37065 | Down | -0.0515772632 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 1.2563738812 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Human Serum Albumin | DB00062 | BTD00059 | BIOD00059 |
| Serum albumin iodonated | DB00064 | BTD00089 | BIOD00089 |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025456 | Proteomics | Functional MTI (Weak) | 21566225 |
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