HCSGD entry for RTN1

1. General information

Official gene symbolRTN1
Entrez ID6252
Gene full namereticulon 1
Other gene symbolsNSP
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0016021Integral component of membraneIEAcellular_component
GO:0030176Integral component of endoplasmic reticulum membraneTAScellular_component
GO:0030182Neuron differentiationIEPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.22929031570.22468432050.91206746260.9118785538

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.6326051518
GSE13712_SHEARDown-0.0454390433
GSE13712_STATICUp0.1636277402
GSE19018Up0.0300327477
GSE19899_A1Down-0.2345559603
GSE19899_A2Down-0.6802473526
PubMed_21979375_A1Down-1.6387674329
PubMed_21979375_A2Down-0.4970120690
GSE35957Down-0.0068601525
GSE36640Up2.8997854564
GSE54402Down-0.2932692126
GSE9593Down-0.0344101757
GSE43922Up0.0029097999
GSE24585Up0.7519932611
GSE37065Down-0.0143600983
GSE28863_A1Down-0.1221289624
GSE28863_A2Down-0.0461883970
GSE28863_A3Up0.2088951732
GSE28863_A4Down-0.0340313300
GSE48662Down-0.0463417137

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.