HCSGD entry for RPS11

1. General information

Official gene symbolRPS11
Entrez ID6205
Gene full nameribosomal protein S11
Other gene symbolsS11
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000184Nuclear-transcribed mRNA catabolic process, nonsense-mediated decayTASbiological_process
GO:0003735Structural constituent of ribosomeIEAmolecular_function
GO:0005829CytosolTAScellular_component
GO:0005840RibosomeIEA NAScellular_component
GO:0006412TranslationIC IEA NAS TASbiological_process
GO:0006413Translational initiationTASbiological_process
GO:0006414Translational elongationTASbiological_process
GO:0006415Translational terminationTASbiological_process
GO:0006614SRP-dependent cotranslational protein targeting to membraneTASbiological_process
GO:0010467Gene expressionTASbiological_process
GO:0016032Viral processTASbiological_process
GO:0016070RNA metabolic processTASbiological_process
GO:0016071MRNA metabolic processTASbiological_process
GO:0019058Viral life cycleTASbiological_process
GO:0019083Viral transcriptionTASbiological_process
GO:0019843RRNA bindingIEAmolecular_function
GO:0022627Cytosolic small ribosomal subunitIDAcellular_component
GO:0044267Cellular protein metabolic processTASbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.78302403780.32700726420.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0392349471
GSE13712_SHEARDown-0.5916146782
GSE13712_STATICDown-0.4043426618
GSE19018Down-0.0040399229
GSE19899_A1Up0.2466496755
GSE19899_A2Up0.1094529713
PubMed_21979375_A1Up0.0417007153
PubMed_21979375_A2Down-0.1198596701
GSE35957Up0.5556069997
GSE36640Down-0.1369863369
GSE54402Up0.1269096835
GSE9593Down-0.5046628512
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.4000025771

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.


PubMed ID of the article

Sentenece the gene occurs

25785348This includes several translation initiation factors (eIF2C2, eIF2B4, eIF3I, eIF3L, eIF4A1) and elongation factors (eEF1G, eEF1A) as well as 40S (RPS4X, RPS7, RPS11 and RPS20) and 60S ribosomal subunits (RPL10, RPL11, RPL18 and RPL35a)
Entries Per Page
Displaying Page of