HCSGD entry for RPS5
1. General information
| Official gene symbol | RPS5 |
|---|---|
| Entrez ID | 6193 |
| Gene full name | ribosomal protein S5 |
| Other gene symbols | S5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000184 | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | TAS | biological_process |
| GO:0003723 | RNA binding | IEA NAS | molecular_function |
| GO:0003729 | MRNA binding | IDA | molecular_function |
| GO:0003735 | Structural constituent of ribosome | IDA IEA | molecular_function |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006412 | Translation | IC IEA IGI NAS TAS | biological_process |
| GO:0006413 | Translational initiation | IC TAS | biological_process |
| GO:0006414 | Translational elongation | TAS | biological_process |
| GO:0006415 | Translational termination | TAS | biological_process |
| GO:0006450 | Regulation of translational fidelity | IGI | biological_process |
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0015935 | Small ribosomal subunit | IEA | cellular_component |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0016070 | RNA metabolic process | TAS | biological_process |
| GO:0016071 | MRNA metabolic process | TAS | biological_process |
| GO:0019058 | Viral life cycle | TAS | biological_process |
| GO:0019083 | Viral transcription | TAS | biological_process |
| GO:0022627 | Cytosolic small ribosomal subunit | IDA | cellular_component |
| GO:0030529 | Ribonucleoprotein complex | IDA | cellular_component |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8494265225 | 0.1155415600 | 0.9999902473 | 0.6512140043 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0187513702 |
| GSE13712_SHEAR | Down | -0.1270100991 |
| GSE13712_STATIC | Down | -0.0834850669 |
| GSE19018 | Down | -0.0170025791 |
| GSE19899_A1 | Up | 0.0016366709 |
| GSE19899_A2 | Down | -0.1008535679 |
| PubMed_21979375_A1 | Up | 1.0931073594 |
| PubMed_21979375_A2 | Down | -0.1474838326 |
| GSE35957 | Down | -0.3286233921 |
| GSE36640 | Down | -0.3871499673 |
| GSE54402 | Up | 0.4083965756 |
| GSE9593 | Down | -0.0514073656 |
| GSE43922 | Down | -0.0207133430 |
| GSE24585 | Down | -0.5046978536 |
| GSE37065 | Down | -0.7033131775 |
| GSE28863_A1 | Up | 0.2683035557 |
| GSE28863_A2 | Up | 0.4446596881 |
| GSE28863_A3 | Down | -0.1514964999 |
| GSE28863_A4 | Down | -0.0393467326 |
| GSE48662 | Down | -0.6309464013 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1301-3p | MIMAT0005797 | MIRT035988 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-455-3p | MIMAT0004784 | MIRT037868 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-503-5p | MIMAT0002874 | MIRT041103 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT043015 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT045846 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049510 | CLASH//qRT-PCR | Functional MTI (Weak) | 23622248 |
| hsa-miR-23a-3p | MIMAT0000078 | MIRT050401 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
