HCSGD entry for RPS2
1. General information
Official gene symbol | RPS2 |
---|---|
Entrez ID | 6187 |
Gene full name | ribosomal protein S2 |
Other gene symbols | LLREP3 S2 |
Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network

This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
---|---|---|---|
GO:0000184 | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | TAS | biological_process |
GO:0003723 | RNA binding | IEA | molecular_function |
GO:0003729 | MRNA binding | IDA | molecular_function |
GO:0003735 | Structural constituent of ribosome | IDA IEA | molecular_function |
GO:0005515 | Protein binding | IPI | molecular_function |
GO:0005654 | Nucleoplasm | IDA | cellular_component |
GO:0005730 | Nucleolus | IDA | cellular_component |
GO:0005829 | Cytosol | TAS | cellular_component |
GO:0005840 | Ribosome | IEA | cellular_component |
GO:0006412 | Translation | IC IEA TAS | biological_process |
GO:0006413 | Translational initiation | TAS | biological_process |
GO:0006414 | Translational elongation | TAS | biological_process |
GO:0006415 | Translational termination | TAS | biological_process |
GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | TAS | biological_process |
GO:0010467 | Gene expression | TAS | biological_process |
GO:0015935 | Small ribosomal subunit | IEA | cellular_component |
GO:0016032 | Viral process | TAS | biological_process |
GO:0016070 | RNA metabolic process | TAS | biological_process |
GO:0016071 | MRNA metabolic process | TAS | biological_process |
GO:0017134 | Fibroblast growth factor binding | IPI | molecular_function |
GO:0019058 | Viral life cycle | TAS | biological_process |
GO:0019083 | Viral transcription | TAS | biological_process |
GO:0019899 | Enzyme binding | IPI | molecular_function |
GO:0022627 | Cytosolic small ribosomal subunit | IDA | cellular_component |
GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
GO:0051347 | Positive regulation of transferase activity | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
p-value up | p-value down | FDR up | FDR down |
---|---|---|---|
0.9832049010 | 0.2821191748 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
Data source | Up or down | Log fold change |
---|---|---|
GSE11954 | Down | -0.0235601453 |
GSE13712_SHEAR | Down | -0.1587039109 |
GSE13712_STATIC | Down | -0.1546995052 |
GSE19018 | Up | 0.0850634754 |
GSE19899_A1 | Down | -0.0549927356 |
GSE19899_A2 | Down | -0.0882395048 |
PubMed_21979375_A1 | Up | 0.0867468383 |
PubMed_21979375_A2 | Up | 0.0208172079 |
GSE35957 | Down | -0.0866732983 |
GSE36640 | Down | -0.3417931005 |
GSE54402 | Up | 0.0281884341 |
GSE9593 | Down | -0.0053928890 |
GSE43922 | - | - |
GSE24585 | - | - |
GSE37065 | - | - |
GSE28863_A1 | - | - |
GSE28863_A2 | - | - |
GSE28863_A3 | - | - |
GSE28863_A4 | - | - |
GSE48662 | Down | -0.4410208684 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
---|---|---|---|---|---|
hsa-miR-16-5p | MIMAT0000069 | MIRT031671 | Proteomics | Functional MTI (Weak) | 18668040 |
hsa-miR-1250-5p | MIMAT0005902 | MIRT035864 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-1301-3p | MIMAT0005797 | MIRT036012 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-940 | MIMAT0004983 | MIRT036604 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-760 | MIMAT0004957 | MIRT036761 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-455-3p | MIMAT0004784 | MIRT037900 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-423-5p | MIMAT0004748 | MIRT038055 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-361-3p | MIMAT0004682 | MIRT038274 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-25-5p | MIMAT0004498 | MIRT038957 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-615-3p | MIMAT0003283 | MIRT040163 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-18a-3p | MIMAT0002891 | MIRT040839 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-423-3p | MIMAT0001340 | MIRT042586 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-324-5p | MIMAT0000761 | MIRT043030 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-331-3p | MIMAT0000760 | MIRT043266 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-328-3p | MIMAT0000752 | MIRT043802 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-330-3p | MIMAT0000751 | MIRT043827 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-361-5p | MIMAT0000703 | MIRT044087 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-99b-5p | MIMAT0000689 | MIRT044194 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-186-5p | MIMAT0000456 | MIRT045205 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-125a-5p | MIMAT0000443 | MIRT045736 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-222-3p | MIMAT0000279 | MIRT046672 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-34a-5p | MIMAT0000255 | MIRT047364 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-196a-5p | MIMAT0000226 | MIRT048173 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-22-3p | MIMAT0000077 | MIRT050452 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-3943 | MIMAT0018359 | MIRT052895 | CLASH | Functional MTI (Weak) | 23622248 |
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