HCSGD entry for RPLP1
1. General information
| Official gene symbol | RPLP1 |
|---|---|
| Entrez ID | 6176 |
| Gene full name | ribosomal protein, large, P1 |
| Other gene symbols | LP1 P1 RPP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000184 | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | TAS | biological_process |
| GO:0003723 | RNA binding | TAS | molecular_function |
| GO:0003735 | Structural constituent of ribosome | NAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006412 | Translation | NAS TAS | biological_process |
| GO:0006413 | Translational initiation | TAS | biological_process |
| GO:0006414 | Translational elongation | TAS | biological_process |
| GO:0006415 | Translational termination | TAS | biological_process |
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0016070 | RNA metabolic process | TAS | biological_process |
| GO:0016071 | MRNA metabolic process | TAS | biological_process |
| GO:0019058 | Viral life cycle | TAS | biological_process |
| GO:0019083 | Viral transcription | TAS | biological_process |
| GO:0022625 | Cytosolic large ribosomal subunit | IDA | cellular_component |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5392959158 | 0.6108122108 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0537560466 |
| GSE13712_SHEAR | Down | -0.0673226715 |
| GSE13712_STATIC | Down | -0.2278720437 |
| GSE19018 | Up | 0.0820187088 |
| GSE19899_A1 | Down | -0.0379923595 |
| GSE19899_A2 | Down | -0.0388116842 |
| PubMed_21979375_A1 | Up | 0.1453604293 |
| PubMed_21979375_A2 | Up | 0.1239889464 |
| GSE35957 | Down | -0.0495570365 |
| GSE36640 | Down | -0.2907303839 |
| GSE54402 | Up | 0.1017288356 |
| GSE9593 | Up | 0.0661245018 |
| GSE43922 | Up | 0.1679097182 |
| GSE24585 | Up | 0.1845150874 |
| GSE37065 | Down | -0.2335854775 |
| GSE28863_A1 | Up | 0.2811664268 |
| GSE28863_A2 | Up | 0.5380004775 |
| GSE28863_A3 | Down | -0.6509910901 |
| GSE28863_A4 | Up | 0.1313335333 |
| GSE48662 | Down | -0.1997464655 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029812 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031818 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1180-3p | MIMAT0005825 | MIRT035944 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037205 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037548 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038374 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042584 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042894 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044726 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT044994 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-204-5p | MIMAT0000265 | MIRT047014 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048543 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049385 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT049854 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3188 | MIMAT0015070 | MIRT052811 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3605-3p | MIMAT0017982 | MIRT052847 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
