HCSGD entry for TRAPPC11
1. General information
| Official gene symbol | TRAPPC11 |
|---|---|
| Entrez ID | 60684 |
| Gene full name | trafficking protein particle complex 11 |
| Other gene symbols | C4orf41 FOIGR GRY |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9408971886 | 0.0667044375 | 0.9999902473 | 0.4872696810 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1418976999 |
| GSE13712_SHEAR | Down | -0.0048506357 |
| GSE13712_STATIC | Down | -0.0448613155 |
| GSE19018 | Down | -0.1582771983 |
| GSE19899_A1 | Down | -0.1970707928 |
| GSE19899_A2 | Down | -0.4292486455 |
| PubMed_21979375_A1 | Down | -0.0974166554 |
| PubMed_21979375_A2 | Down | -0.1681106431 |
| GSE35957 | Up | 0.0723556910 |
| GSE36640 | Up | 0.0860589259 |
| GSE54402 | Down | -0.3962861045 |
| GSE9593 | Down | -0.1471678473 |
| GSE43922 | Down | -0.0368991824 |
| GSE24585 | Up | 0.2913170422 |
| GSE37065 | Up | 0.0395955778 |
| GSE28863_A1 | Up | 0.1128647973 |
| GSE28863_A2 | Up | 0.1771926378 |
| GSE28863_A3 | Down | -0.8793127392 |
| GSE28863_A4 | Down | -0.3552454223 |
| GSE48662 | Down | -0.6075946419 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-877-3p | MIMAT0004950 | MIRT037147 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049471 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
