HCSGD entry for TRMT11
1. General information
| Official gene symbol | TRMT11 |
|---|---|
| Entrez ID | 60487 |
| Gene full name | tRNA methyltransferase 11 homolog (S. cerevisiae) |
| Other gene symbols | C6orf75 MDS024 TRM11 TRMT11-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000049 | TRNA binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0008033 | TRNA processing | IEA | biological_process |
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1476610045 | 0.4677251738 | 0.7699257726 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0158026842 |
| GSE13712_SHEAR | Up | 0.8052188786 |
| GSE13712_STATIC | Up | 0.4792676898 |
| GSE19018 | Up | 0.1521639753 |
| GSE19899_A1 | Up | 0.1933002014 |
| GSE19899_A2 | Up | 0.2539567994 |
| PubMed_21979375_A1 | Up | 0.2112533219 |
| PubMed_21979375_A2 | Down | -0.0353949674 |
| GSE35957 | Down | -0.1343791575 |
| GSE36640 | Down | -0.2840753527 |
| GSE54402 | Down | -0.0214328317 |
| GSE9593 | Down | -0.1010125786 |
| GSE43922 | Up | 0.0792443974 |
| GSE24585 | Down | -0.4841777546 |
| GSE37065 | Up | 0.3611219458 |
| GSE28863_A1 | Up | 0.3252480239 |
| GSE28863_A2 | Up | 0.4305723470 |
| GSE28863_A3 | Up | 0.0910250001 |
| GSE28863_A4 | Down | -0.2775111788 |
| GSE48662 | Down | -0.5936048711 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029017 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
