HCSGD entry for BCL3
1. General information
Official gene symbol | BCL3 |
---|---|
Entrez ID | 602 |
Gene full name | B-cell CLL/lymphoma 3 |
Other gene symbols | BCL4 D19S37 |
Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
---|---|---|---|
GO:0000060 | Protein import into nucleus, translocation | IMP | biological_process |
GO:0002268 | Follicular dendritic cell differentiation | IEA | biological_process |
GO:0002315 | Marginal zone B cell differentiation | IEA | biological_process |
GO:0002455 | Humoral immune response mediated by circulating immunoglobulin | IEA | biological_process |
GO:0002467 | Germinal center formation | IEA | biological_process |
GO:0003677 | DNA binding | IEA | molecular_function |
GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
GO:0005515 | Protein binding | IPI | molecular_function |
GO:0005634 | Nucleus | IDA | cellular_component |
GO:0005737 | Cytoplasm | IDA | cellular_component |
GO:0006351 | Transcription, DNA-templated | IDA | biological_process |
GO:0006974 | Cellular response to DNA damage stimulus | IDA | biological_process |
GO:0007249 | I-kappaB kinase/NF-kappaB signaling | IDA | biological_process |
GO:0008134 | Transcription factor binding | IPI | molecular_function |
GO:0009615 | Response to virus | IDA | biological_process |
GO:0010225 | Response to UV-C | IDA | biological_process |
GO:0019730 | Antimicrobial humoral response | IEA | biological_process |
GO:0030198 | Extracellular matrix organization | IEA | biological_process |
GO:0030330 | DNA damage response, signal transduction by p53 class mediator | IMP | biological_process |
GO:0030674 | Protein binding, bridging | TAS | molecular_function |
GO:0032729 | Positive regulation of interferon-gamma production | IEA | biological_process |
GO:0032996 | Bcl3-Bcl10 complex | IDA | cellular_component |
GO:0033257 | Bcl3/NF-kappaB2 complex | IDA | cellular_component |
GO:0042088 | T-helper 1 type immune response | IEA | biological_process |
GO:0042345 | Regulation of NF-kappaB import into nucleus | IEP | biological_process |
GO:0042536 | Negative regulation of tumor necrosis factor biosynthetic process | IEA | biological_process |
GO:0042742 | Defense response to bacterium | IEA | biological_process |
GO:0042771 | Intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator | IMP | biological_process |
GO:0042832 | Defense response to protozoan | IEA | biological_process |
GO:0042981 | Regulation of apoptotic process | IDA | biological_process |
GO:0043066 | Negative regulation of apoptotic process | IDA | biological_process |
GO:0043234 | Protein complex | IDA | cellular_component |
GO:0045064 | T-helper 2 cell differentiation | IEA | biological_process |
GO:0045082 | Positive regulation of interleukin-10 biosynthetic process | IEA | biological_process |
GO:0045415 | Negative regulation of interleukin-8 biosynthetic process | IMP | biological_process |
GO:0045727 | Positive regulation of translation | IMP | biological_process |
GO:0045892 | Negative regulation of transcription, DNA-templated | IDA | biological_process |
GO:0045893 | Positive regulation of transcription, DNA-templated | IDA | biological_process |
GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
GO:0048471 | Perinuclear region of cytoplasm | IEA | cellular_component |
GO:0048536 | Spleen development | IEA | biological_process |
GO:0051101 | Regulation of DNA binding | IEP | biological_process |
GO:0051457 | Maintenance of protein location in nucleus | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
p-value up | p-value down | FDR up | FDR down |
---|---|---|---|
0.9770445120 | 0.4637461153 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
Data source | Up or down | Log fold change |
---|---|---|
GSE11954 | - | - |
GSE13712_SHEAR | - | - |
GSE13712_STATIC | - | - |
GSE19018 | - | - |
GSE19899_A1 | - | - |
GSE19899_A2 | - | - |
PubMed_21979375_A1 | - | - |
PubMed_21979375_A2 | - | - |
GSE35957 | - | - |
GSE36640 | - | - |
GSE54402 | - | - |
GSE9593 | - | - |
GSE43922 | - | - |
GSE24585 | - | - |
GSE37065 | - | - |
GSE28863_A1 | - | - |
GSE28863_A2 | - | - |
GSE28863_A3 | - | - |
GSE28863_A4 | - | - |
GSE48662 | Down | -0.1756599522 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
---|---|---|---|---|---|
hsa-miR-125b-5p | MIMAT0000423 | MIRT006500 | Luciferase reporter assay | Functional MTI | 20658525 |
hsa-miR-26b-5p | MIMAT0000083 | MIRT030231 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
---|---|
8809053 | The protein levels of inhibitory I kappa B-alpha and Bcl-3 components were not affected by aging in any of the tissues studied |
8809053 | Cellular senescence also slightly decreased the protein levels of I kappa B-alpha and Bcl-3 |
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