HCSGD entry for PRPH2

1. General information

Official gene symbolPRPH2
Entrez ID5961
Gene full nameperipherin 2 (retinal degeneration, slow)
Other gene symbolsAOFMD AVMD CACD2 DS PRPH RDS RP7 TSPAN22 rd2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0007155Cell adhesionIEAbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0060041Retina development in camera-type eyeIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.20271743850.34964937120.86929377951.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.2021318399
GSE13712_SHEARUp0.2156996245
GSE13712_STATICUp0.1320925216
GSE19018Down-0.3723018643
GSE19899_A1Up0.0537855661
GSE19899_A2Down-0.2134936150
PubMed_21979375_A1Up0.1289379751
PubMed_21979375_A2Down-0.1595677903
GSE35957Up0.7358830716
GSE36640Down-0.1455795198
GSE54402Down-0.0754473464
GSE9593Up0.0713096677
GSE43922Down-0.1793856062
GSE24585Down-0.0623811412
GSE37065Down-0.2200153958
GSE28863_A1Up0.3925591357
GSE28863_A2Up0.4319400765
GSE28863_A3Up0.1004260258
GSE28863_A4Up0.2797573394
GSE48662Up0.1904029718

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.