HCSGD entry for RCN2
1. General information
| Official gene symbol | RCN2 |
|---|---|
| Entrez ID | 5955 |
| Gene full name | reticulocalbin 2, EF-hand calcium binding domain |
| Other gene symbols | E6BP ERC-55 ERC55 TCBP49 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005783 | Endoplasmic reticulum | TAS | cellular_component |
| GO:0005788 | Endoplasmic reticulum lumen | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8061511037 | 0.0205462824 | 0.9999902473 | 0.2770485143 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2063295469 |
| GSE13712_SHEAR | Down | -0.1771934842 |
| GSE13712_STATIC | Down | -0.1490972652 |
| GSE19018 | Up | 0.4692866371 |
| GSE19899_A1 | Down | -1.9994536720 |
| GSE19899_A2 | Down | -0.7628456233 |
| PubMed_21979375_A1 | Down | -1.4287677857 |
| PubMed_21979375_A2 | Down | -0.8705183564 |
| GSE35957 | Up | 0.4714943708 |
| GSE36640 | Down | -0.0076759753 |
| GSE54402 | Down | -0.5311269818 |
| GSE9593 | Up | 0.0183141227 |
| GSE43922 | Down | -1.0809338344 |
| GSE24585 | Up | 0.3684494291 |
| GSE37065 | Up | 0.1971199289 |
| GSE28863_A1 | Down | -0.0397444005 |
| GSE28863_A2 | Up | 0.0932380439 |
| GSE28863_A3 | Down | -0.4289345554 |
| GSE28863_A4 | Up | 0.1178230569 |
| GSE48662 | Up | 0.1944427035 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT001507 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-375 | MIMAT0000728 | MIRT019940 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT025032 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029831 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048556 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-99a-5p | MIMAT0000097 | MIRT048612 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
