HCSGD entry for RBP3

1. General information

Official gene symbolRBP3
Entrez ID5949
Gene full nameretinol binding protein 3, interstitial
Other gene symbolsD10S64 D10S65 D10S66 IRBP RBPI
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001523Retinoid metabolic processTASbiological_process
GO:0005501Retinoid bindingTASmolecular_function
GO:0005576Extracellular regionTAScellular_component
GO:0005615Extracellular spaceIDAcellular_component
GO:0006508ProteolysisIEAbiological_process
GO:0006629Lipid metabolic processTASbiological_process
GO:0006810TransportIEAbiological_process
GO:0007601Visual perceptionTASbiological_process
GO:0007603Phototransduction, visible lightTASbiological_process
GO:0008236Serine-type peptidase activityIEAmolecular_function
GO:0016918Retinal bindingIEAmolecular_function
GO:0019841Retinol bindingIEAmolecular_function
GO:0033165Interphotoreceptor matrixIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.50841121920.88061489310.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0669208892
GSE13712_SHEARUp0.0437782235
GSE13712_STATICDown-0.0853542902
GSE19018Up0.2229142113
GSE19899_A1Down-0.0457786116
GSE19899_A2Up0.2476843630
PubMed_21979375_A1Up0.1970281803
PubMed_21979375_A2Down-0.0501474465
GSE35957Down-0.1525511597
GSE36640Up0.0245764045
GSE54402Up0.1831878833
GSE9593Down-0.0634268977
GSE43922Up0.0233394672
GSE24585Up0.0968591029
GSE37065Up0.0685315587
GSE28863_A1Up0.0744615528
GSE28863_A2Up0.0204099804
GSE28863_A3Up0.2532905279
GSE28863_A4Up0.0049383365
GSE48662Up0.0288607615

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

Vitamin ADB00162 NUTR00007 | APRD00486

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.